Job Description P0AEE3 Confidence 98.72% Date Thu Jan 5 11:23:07 GMT 2012 Rank 190 Aligned Residues 62 % Identity 15% Template c2yt7A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3 Resolution UNK

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		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																	.	.
Query SS confidence																							.																	.	.
Query Sequence		D	Q	L	Q	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	.	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	I	.	.	S	A	L	E	T	M	D	Q	V	A	E	I	R	P	G	S	V	I	P	V	V	V	M	R	D
Query Conservation																							.																	.	.
Alig confidence																							.																	.	.
Template Conservation
Template Sequence		S	L	L	P	T	A	V	I	A	N	L	L	H	G	G	P	A	E	R	S	G	A	L	S	I	G	D	R	L	T	A	I	N	G	T	S	L	V	G	L	P	L	A	A	C	Q	A	A	V	R	E	T	K	S	Q	T	S	V	T	L	S	I	V	H	C
Template Known Secondary structure		S	S	S										T	T	S	T	T	G	G	G	S	S			T	T							S	S		B		T	T	S												T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions