Job Description P0AEE3 Confidence 98.92% Date Thu Jan 5 11:23:07 GMT 2012 Rank 100 Aligned Residues 144 % Identity 16% Template c2xrcD_ PDB info PDB header:immune system Chain: D: PDB Molecule:human complement factor i; PDBTitle: human complement factor i Resolution 2.69 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.
Predicted Secondary structure																																																										.															.	.	.	.	.	.	.
Query SS confidence																																																										.															.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	.	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.	.	.	.	.	.	D	L
Query Conservation																																																										.															.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																	.																							.															.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	Q	V	A	I	.	.	.	.	.	.	.	.	.	.	.	K	D	A	S	G	I	T	C	G	G	I	Y	I	G	G	C	.	W	I	L	T	A	A	H	C	L	R	A	S	K	T	H	R	Y	Q	I	W	T	T	I	V	I	E	Y	V	D	R	I	I	F	H	E	N	Y	N	A	G	T	Y	Q	N	D	I
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.			T	T										S	T	T	.						S	T	T	G	G	G		S	S																					T	T			S	S	S		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		334	.	.	.	.	.												340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		128	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.
Predicted Secondary structure									.	.	.	.	.										.																																																					.	.
Query SS confidence									.	.	.	.	.										.																																																					.	.
Query Sequence		A	V	L	K	I	N	A	.	.	.	.	.	T	G	G	L	P	T	I	P	I	.	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	.	.	I	N	H	G
Query Conservation									.	.	.	.	.										.																																																					.	.
Alig confidence									.	.	.	.	.										.																			.	.	.	.	.	.	.																												.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		A	L	I	E	M	K	K	D	G	N	K	K	D	C	E	L	P	P	A	C	V	P	W	S	P	Y	L	F	Q	P	N	D	T	C	I	V	S	G	W	G	.	.	.	.	.	.	.	E	V	K	L	I	S	N	C	S	K	F	Y	G	N	R	F	Y	E	K	E	M	E	C	A	G	T	Y	D	G	S	I	D	A
Template Known Secondary structure										S	T	T									B			S		T	T	S	S		S	S										.	.	.	.	.	.	.						S		T	T	T	T	S	S	T	T			T	T	T								S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.								.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		200	.	.	.	.	.	.			.	.	.	210	.			.	.	.	.	.	.	.
Predicted Secondary structure									.	.						.	.
Query SS confidence									.	.						.	.
Query Sequence		N	S	G	G	A	L	V	.	.	N	S	L	G	E	.	.	L	M	G	I	N	T	L
Query Conservation									.	.						.	.
Alig confidence									.	.						.	.
Template Conservation
Template Sequence		C	S	G	G	P	L	V	C	M	D	A	N	N	V	T	Y	V	W	G	V	V	S	W
Template Known Secondary structure												T	T	S
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions