Job Description P0AEE3 Confidence 95.07% Date Thu Jan 5 11:23:07 GMT 2012 Rank 360 Aligned Residues 119 % Identity 23% Template c2wv9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus Resolution 2.75 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N
Query Conservation
Alig confidence																								.	.	.												.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.												.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		A	G	V	G	V	M	H	E	G	V	F	H	T	L	W	H	T	T	R	G	A	A	.	.	.	I	M	S	G	E	G	R	L	T	P	Y	.	.	.	W	G	N	V	K	E	D	R	V	.	.	.	.	.	.	.	.	.	T	Y	G	G	P	W	K	L	D	Q	K	W	N	G	V	D	D	V	Q	M	I	V	V
Template Known Secondary structure									T	T										T	T			.	.	.				S	S	S						.	.	.				T	T	T	T			.	.	.	.	.	.	.	.	.			S	S	S									T	T
Template Predicted Secondary structure																								.	.	.												.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F
Query Conservation
Alig confidence					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		E	P	G	.	.	.	.	.	.	K	P	A	I	N	V	Q	T	K	P	G	I	F	K	T	A	H	G	E	I	G	A	V	S	L	D	Y	P	I	G	T	S	G	S	P	I	V	N	S	N	G	E	I	I	G	L	Y	G	N	G	V
Template Known Secondary structure			T	T	.	.	.	.	.	.	S															S	S	S											G	G	G	T	T						T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		101	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions