Job Description P0AEE3 Confidence 97.95% Date Thu Jan 5 11:23:07 GMT 2012 Rank 287 Aligned Residues 186 % Identity 19% Template c2vntE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: urokinase-type plasminogen activator inhibitor complex with2 a 1-(7-sulphoamidoisoquinolinyl)guanidine Resolution 2.2 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																						.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.											.
Template Sequence		P	W	F	A	A	I	Y	R	R	H	R	G	G	S	V	T	Y	.	.	.	.	.	.	V	C	G	G	S	L	M	S	P	C	.	W	V	I	S	A	T	H	C	F	I	D	Y	P	K	K	E	D	Y	I	V	Y	L	G	R	S	R	L	N	S	N	T	Q	G	E	M	K	F	E	V	E	N	L	I	L	H	K
Template Known Secondary structure		T	T									S	S	S					.	.	.	.	.	.									T	T	.						G	G	G	G	T	T	S			G	G	G						S			B	S	S	S			T	T													T
Template Predicted Secondary structure																			.	.	.	.	.	.											.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	.	.	.	.	.	.	.	.	.	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	.	.	.	.	.	.	.	.	.	Q	T	I	T	Q	G	I	I	S	A	T
Query Conservation																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	S	A	D	T	L	A	H	H	N	D	I	A	L	L	K	I	R	S	K	E	G	R	C	A	Q	P	S	R	T	I	Q	T	I	C	L	P	S	M	Y	N	D	P	Q	F	G	T	S	C	E	I	T	G	F	G	K	E	N	S	T	D	Y	L	Y	P	E	Q	L	K	M	T	V	V	K	L	I	S	H	R
Template Known Secondary structure		T					S	S				S										T	T	S						B	T	T	B				B				T	T					T	T								S			S	S	T	T		S	S			S	B
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.													.	.	.
Query Sequence		G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	.	.	.	.	.	.	.	.	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M
Query Conservation																								.	.	.	.	.	.	.	.													.	.	.
Alig confidence																								.	.	.	.	.	.	.	.													.	.	.																		.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		E	C	Q	Q	P	H	Y	Y	G	S	E	V	T	T	K	M	L	C	A	A	D	P	Q	W	K	T	D	S	C	Q	G	D	S	G	G	P	L	V	C	S	L	Q	G	R	M	T	L	T	G	I	V	S	W	G	R	G	C	A	L	K	D	K	.	.	.	.	P	G	V	Y	T	R	V	S	H	F	L	P	W	I
Template Known Secondary structure				T	S	T	T	T	T	G	G	G			T	T							T	T	S	S					T	T		T	T								T	T												S	S	S	S	B	T	T	B	.	.	.	.							G	G	G
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250
		246	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	I	R	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	H	T	K	E	E
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions