Job Description P0AEE3 Confidence 96.59% Date Thu Jan 5 11:23:07 GMT 2012 Rank 337 Aligned Residues 114 % Identity 17% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P
Query Conservation
Alig confidence																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	I	H	M	E	G	V	F	H	T	M	W	H	V	T	R	G	S	V	I	C	H	E	T	G	.	.	.	.	.	.	R	L	E	P	S	W	A	D	V	R	N	D	M	I	S	Y	.	.	.	.	.	.	.	.	.	G	G	G	W	R	L	G	D	K	W	D	K	E	E	D	V	Q	V	L	A	I	E
Template Known Secondary structure								T	T										T	T						S	S		.	.	.	.	.	.									T	T	T	T					.	.	.	.	.	.	.	.	.	S	S	S									S	S
Template Predicted Secondary structure																													.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		P	G	K	N	P	K	H	.	.	.	.	.	.	V	Q	T	K	P	G	L	F	K	T	L	T	G	E	I	G	A	V	T	L	D	F	K	P	G	T	S	G	S	P	I	I	N	K	K	G	K	V	I	G	L	Y
Template Known Secondary structure		T	T	S					.	.	.	.	.	.											S	S	S											T	T		T	T						S	S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions