Job Description P0AEE3 Confidence 96.65% Date Thu Jan 5 11:23:07 GMT 2012 Rank 335 Aligned Residues 172 % Identity 16% Template c2r0lA_ PDB info PDB header:hydrolase, immune system Chain: A: PDB Molecule:hepatocyte growth factor activator; PDBTitle: short form hgfa with inhibitory fab75 Resolution 2.20 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	G	R	V	F	E	A	L	L	V	G	S	D
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.														.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		P	W	L	A	A	I	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S	F	C	A	G	S	L	V	H	T	C	.	W	V	V	S	A	A	H	C	F	S	H	S	P	P	R	D	S	V	S	V	V	L	G	Q	H	F	F	N	R	T	T	D	V	T	Q	T	F	G	I	E	K	Y	I	P	Y	T
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	T	.						G	G	G	G	T	T				G	G	G						S			B	T	T				S	S													T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		28	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		123	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		S	L	T	.	.	.	.	.	.	.	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		L	Y	S	V	F	N	P	S	D	H	D	L	V	L	I	R	L	K	K	K	G	D	R	C	A	T	R	S	Q	F	V	Q	P	I	C	L	.	.	.	.	.	.	P	E	P	G	S	T	F	P	A	G	H	K	C	Q	I	A	G	W	G	H	L	D	E	N	V	S	G	Y	S	S	S	L	R	E	A	L	V	P
Template Known Secondary structure		T			T	T	S	T	T	T	T										S	S	S		S	S			B	T	T	B				B		.	.	.	.	.	.			T	T					T	T								S			S	S	S	S			S			S	B
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
																																		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																			.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		L	V	A	D	H	K	C	S	S	P	E	V	Y	G	A	D	I	S	P	N	M	L	C	A	G	Y	F	D	C	K	S	D	A	C	Q	G	D	S	G	G	P	L	A	C	E	K	N	G	V	A	Y	L	Y	G	I	I	S	W	G	D	G	C	G	R	L	H	K	P	.	.	.	.	G	V	Y	T	R	V	A	N
Template Known Secondary structure		B							T	S	T	T	T	T	G	G	G			T	T					S		S	S	S			B			T	T		T	T								T	T												S	T	T	T		T	T			.	.	.	.						G	G	G
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	K	I	M	D	K	L	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	D	W	I	N	D	R	I	R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions