Job Description P0AEE3 Confidence 99.81% Date Thu Jan 5 11:23:07 GMT 2012 Rank 31 Aligned Residues 98 % Identity 28% Template c2p3wB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) Resolution 1.70 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	I	R	G	Y	I	G	I	G	G	R	E	I	A	P	L	H	A	Q	G	G	G	I	D	Q	L	Q	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	I	S	A	L	E	T	M	D	Q	V	A	E	I	R	P	G	S	V	I
Query Conservation
Alig confidence																												.	.																																														.	.	.
Template Conservation																												.	.																																														.	.	.
Template Sequence		G	S	H	M	K	R	F	I	G	I	R	M	R	T	I	T	P	S	L	V	D	E	P	E	V	S	.	.	S	G	I	Y	V	Q	E	V	A	P	N	S	P	S	Q	R	G	G	I	Q	D	G	D	I	I	V	K	V	N	G	R	P	L	V	D	S	S	E	L	Q	E	A	V	L	T	.	.	.	E	S	P	L
Template Known Secondary structure																												.	.	S	S								S	S	S						T			T	T							T	T					S											.	.	.		S	S
Template Predicted Secondary structure																												.	.																																														.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	V	M	R	D	D	K	Q	L	T	L	Q	V	T	I	Q	E	Y	P	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	V	R	R	G	N	D	D	L	L	F	S	I	A	P	E	V	V	M	G	G
Template Known Secondary structure								T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions