Job Description P0AEE3 Confidence 98.89% Date Thu Jan 5 11:23:07 GMT 2012 Rank 113 Aligned Residues 197 % Identity 17% Template c2ok5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b Resolution 2.30 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.								.																.	.
Query SS confidence																																																						.	.	.								.																.	.
Query Sequence		R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	.	.	.	I	I	V	A	L	Q	D	.	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.
Query Conservation																																																						.	.	.								.																.	.
Alig confidence																							.	.	.	.	.	.	.										.															.	.	.								.																.	.
Template Conservation																							.	.	.	.	.	.	.										.
Template Sequence		Y	H	K	Q	P	W	Q	A	K	I	S	V	I	R	P	S	K	G	H	E	S	.	.	.	.	.	.	.	C	M	G	A	V	V	S	E	Y	.	F	V	L	T	A	A	H	C	F	T	V	D	D	K	E	H	S	I	K	V	S	V	G	G	E	K	R	D	L	E	I	E	V	V	L	F	H	P	N	Y	N	I
Template Known Secondary structure					S	T	T									T	T	S					.	.	.	.	.	.	.							S	S	S	.						G	G	G			T	T			G	G	G						T	T		S			B									T	T			T
Template Predicted Secondary structure																							.	.	.	.	.	.	.										.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.								.	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
																126	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.																					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	V	L	K	I	N	A	T	.	.	.	.	G	G	L	P	T	I	P	I	N	A	R	R	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	K	K	E	A	G	I	P	E	F	Y	D	Y	D	V	A	L	I	K	L	K	N	K	L	K	Y	G	Q	T	I	R	P	I	C	L	P	C	T	E	G	T	T	R	A	L	R	L	P	P	T	T	T	C	Q	Q	Q	K	E	E	L	L	P	A	Q	D	I	K	A	L	F	V	S	E	E	E	K	K	L	T
Template Known Secondary structure		T	T	T	T	T	T	T		S				T	T								S	S					B	T	T	B				B		S	S	B							T	T			T	T											S		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.																		.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																				.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																				.	.	.
Query Sequence		I	T	Q	G	I	I	S	A	T	G	R	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	T	G	R	Q	N	F	L	Q	T	.	.	.	.	.	.	.	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	.	.	.	L	M	G	I	N	T	L	S	F
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																				.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		R	K	E	V	Y	I	K	N	G	D	K	K	G	S	C	E	R	D	A	Q	Y	A	P	G	Y	D	K	V	K	D	I	S	E	V	V	T	P	R	F	L	C	T	G	G	V	S	P	Y	A	D	P	N	T	C	R	G	D	S	G	G	P	L	I	V	H	K	R	S	R	F	I	Q	V	G	V	I	S	W	G	V
Template Known Secondary structure										S	T	T							G	G	G	G	S	T	T		T	T		S		G	G	G	T	S		T	T						S	S	S	S	S							G	G	G	T	T								T	T												S
Template Predicted Secondary structure
Template SS confidence
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
		221	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		D	K	S	N	D	G	E	T	.	.	.	.	.	.	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G	R	V	I	R
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	C	K	N	Q	K	R	Q	K	Q	V	P	A	H	A	R	D	F	H	I	N	L	F	Q	V	L	P	W	L	K	E	K	L	Q	D	E	D	L	G	F
Template Known Secondary structure					G	G	G	T	T	T						T	T								G	G	G	S								T	T	T	S				B
Template Predicted Secondary structure
Template SS confidence
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions