 |
Job Description | P0AEE3 | Confidence | 98.90% | Date | Thu Jan 5 11:23:07 GMT 2012 |
Rank | 107 | Aligned Residues | 77 |
% Identity | 19% | Template | c2o2tB_ |
PDB info |
PDB header:structural protein | Chain: B: PDB Molecule:multiple pdz domain protein; |
PDBTitle: the crystal structure of the 1st pdz domain of mpdz
|
Resolution | 2.70 Å |
|
 |
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
. | |
|
. | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
| . |
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | I | G | G | R | E | I | A | P | L | H | A | Q | G | G | G | I | D | Q | L | Q | G | I | V | V | N | E | V | S | P | D | G | P | A | A | N | A | G | . |
I | Q | V | N | D | L | I | I | S | V | D | N | K | P | A | . |
I | . |
. |
S | A | L | E | T | M | D | Q | V | A | E | I | R | P | G | S | V | I | P | V | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
| . |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . | . |   |   |   |   |
|   |
|   |
Template Sequence |   |
L | G | F | S | V | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | S | E | E | L | G | I | F | V | Q | E | I | Q | E | G | S | V | A | H | R | D | G | R | L | K | E | T | D | Q | I | L | A | I | N | G | Q | A | L | D | Q | T | I | T | H | Q | Q | A | I | S | I | L | Q | K | . |
. |
A | K | D | T | V | Q | L | V |
Template Known Secondary structure |   |
S | S |
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |
|
|
|
| T | T | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | . | . |
|
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
. | 210 | . | . | . | . | . | . |
  |
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | R | D | D | K | Q | L | T | L | Q | V |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
I | A | R | G | S | L | P | Q | Y | Y | K | V |
Template Known Secondary structure |   |
 |  | S | S |
|
| G | G | G | G |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|