Job Description P0AEE3 Confidence 98.85% Date Thu Jan 5 11:23:07 GMT 2012 Rank 127 Aligned Residues 169 % Identity 17% Template c2ijd1_ PDB info PDB header:hydrolase, transferase Chain: 1: PDB Molecule:picornain 3c, rna-directed rna polymerase; PDBTitle: crystal structure of the poliovirus precursor protein 3cd Resolution 3.40 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	N	L	A	V	R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.														.										.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.														.										.
Template Sequence		G	F	D	Y	A	V	A	M	A	K	R	N	I	V	T	A	T	T	.	.	.	.	.	.	.	.	.	.	.	.	S	K	G	E	F	T	M	L	G	V	H	D	N	.	V	A	I	L	P	T	H	A	S	.	P	G	E	S	I	V	I	D	G	K	E	V	A	I	L	A	A	K	A	L	A	D	Q	A	G	T
Template Known Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	T	T										B	T	.						G	G	G		.			S					T	T														T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.														.										.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20													.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
				126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.																		.
Query SS confidence		.	.																		.
Query Sequence		.	.	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	.	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G
Query Conservation		.	.																		.
Alig confidence		.	.																		.
Template Conservation
Template Sequence		N	L	E	I	T	I	I	T	L	K	R	N	E	K	F	R	D	I	R	P	H	I	P	T	Q	I	T	E	T	N	D	G	V	L	I	V	N	T	S	K	Y	P	N	M	Y	V	P	V	G	A	V	T	E	Q	G	Y	L	N	L	G	G	R	Q	T	A	R	T	L	M	Y	N	F	P	T	R	A	G	Q	A	G
Template Known Secondary structure												S	S			B				G	G	G	S		S	S													S	S	S	S	T	T																	T	T	S										S				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F
Query Conservation
Alig confidence							.															.	.	.	.	.	.	.	.	.
Template Conservation							.															.	.	.	.	.	.	.	.	.
Template Sequence		G	V	I	T	C	.	T	G	K	V	I	G	M	H	V	G	G	N	G	S	.	.	.	.	.	.	.	.	.	H	G	F	A	A	A	L
Template Known Secondary structure							.	T	T											S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.															.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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