 |
Job Description | P0AEE3 | Confidence | 98.62% | Date | Thu Jan 5 11:23:07 GMT 2012 |
Rank | 230 | Aligned Residues | 59 |
% Identity | 15% | Template | c2e7kA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:maguk p55 subfamily member 2; |
PDBTitle: solution structure of the pdz domain from human maguk p552 subfamily member 2
|
Resolution | UNK |
|
 |
  |   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
. | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | Q | G | I | V | V | N | E | V | S | P | D | G | P | A | A | N | A | G | . |
I | Q | V | N | D | L | I | I | S | V | D | N | K | P | A | I | . |
S | A | L | E | T | M | D | Q | V | A | E | I | R | P | G | S | V | I | P | V | V | V | M | R | D |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   | . | . |   |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
E | G | G | E | L | V | I | A | R | I | L | H | G | G | M | V | A | Q | Q | G | L | L | H | V | G | D | I | I | K | E | V | N | G | Q | P | V | G | S | D | P | R | A | L | Q | E | L | L | R | N | A | S | . |
. |
G | S | V | I | L | K | I | L | S | G |
Template Known Secondary structure |   |
S | S | S | S |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | T |
|
| . | . | S | S | B |
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|