Job Description P0AEE3 Confidence 98.82% Date Thu Jan 5 11:23:07 GMT 2012 Rank 143 Aligned Residues 69 % Identity 25% Template c2dkrA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b Resolution UNK

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																									.																	.	.
Query SS confidence																																									.																	.	.
Query Sequence		I	G	I	G	G	R	E	I	A	P	L	H	A	Q	G	G	G	I	D	Q	L	Q	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	.	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	I	.	.	S	A	L	E	T	M	D	Q	V	A	E	I	R	P	G	S	V	I	P	V	V	V
Query Conservation																																									.																	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																								.																	.	.												.	.
Template Conservation									.	.	.	.	.	.	.	.	.																																																						.	.
Template Sequence		L	G	F	N	I	M	G	.	.	.	.	.	.	.	.	.	G	K	E	Q	N	S	P	I	Y	I	S	R	V	I	P	G	G	V	A	D	R	H	G	G	L	K	R	G	D	Q	L	L	S	V	N	G	V	S	V	E	G	E	Q	H	E	K	A	V	E	L	L	K	A	.	.	A	Q	G	S	V	K	L	V	V
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	S	S	S	S	S										T	T	S										T	T		B					T	T				T	T	S												.	.			S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																																						.	.
Template SS confidence
		18	.	20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.
		336	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions