Job Description P0AEE3 Confidence 99.95% Date Thu Jan 5 11:23:07 GMT 2012 Rank 21 Aligned Residues 168 % Identity 16% Template c1zyoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease; PDBTitle: crystal structure of the serine protease domain of sesbania mosaic2 virus polyprotein Resolution 2.40 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	.	.	.	.	.	E	A	L	L	V	G	S	D	S	L	T	D	L
Query Conservation																																																																.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	P	A	S	L	V	A	I	K	S	G	.	.	.	.	.	.	.	.	.	.	.	P	T	T	I	G	F	G	C	R	T	K	I	E	D	C	L	L	T	A	H	H	V	W	C	N	S	M	R	P	T	G	L	A	K	A	G	K	Q	V	S	V	E	D	W	E	I	S	M	S	S	S	D	K	M	L	D	F
Template Known Secondary structure			S		S	S							T	.	.	.	.	.	.	.	.	.	.	.	T																							T	S	S	S								T	T							S										T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.												.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		128	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	V	L	K	I	N	A	T	.	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V
Query Conservation										.
Alig confidence										.																																														.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		A	I	V	R	V	P	T	H	V	W	S	K	L	G	V	K	S	T	P	L	V	C	P	S	S	K	D	V	I	T	C	Y	G	G	S	S	S	D	C	L	M	S	G	V	G	S	S	S	T	S	E	F	T	W	.	.	.	.	.	.	.	.	K	L	T	H	T	C	P	T	A	A	G	W	S	G	T	P	L	Y
Template Known Secondary structure															T						B					S										S	S	T	T	S												S	S	T	T	.	.	.	.	.	.	.	.										T	T		T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K
Query Conservation
Alig confidence			.																	.	.	.	.	.	.	.
Template Conservation			.																	.	.	.	.	.	.	.
Template Sequence		S	.	S	R	G	V	V	G	M	H	V	G	F	E	E	I	G	K	.	.	.	.	.	.	.	L	N	R	G	V	N	M	F	Y	V	A	N	Y	L	L	R
Template Known Secondary structure			.	S	S												T	T	T	.	.	.	.	.	.	.														T
Template Predicted Secondary structure			.																	.	.	.	.	.	.	.
Template SS confidence
		290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.								.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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