Job Description P0AEE3 Confidence 98.65% Date Thu Jan 5 11:23:07 GMT 2012 Rank 219 Aligned Residues 183 % Identity 14% Template c1z8gA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:serine protease hepsin; PDBTitle: crystal structure of the extracellular region of the transmembrane2 serine protease hepsin with covalently bound preferred substrate. Resolution 1.55 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																															.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.											.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	.	.	.	.	A	D	Q	I	I	V	A	L	Q	D	.	.	.	.	.	.	.	G	R	V	F	E	A	L	L	V	G	S	D	S	L
Query Conservation																																															.	.	.	.											.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.											.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	Q	V	S	L	.	.	.	.	.	.	.	.	.	.	.	R	Y	D	G	A	H	L	C	G	G	S	L	L	S	G	D	.	W	V	L	T	A	A	H	C	F	P	E	R	N	R	V	L	S	R	W	R	V	F	A	G	A	V	A	Q	A	S	P	H	G	L	Q	L	G	V	Q	A	V	V	Y	H	G	G
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.			T	T									S	S	S	S	.						G	G	G			G	G	G			G	G	G						S		S	B	T	T		T	T	S												T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		175	.	.	.	.	180												.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		125														.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	V	L	K	I	N	A	T	G	G	.	.	.	.	.	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	P	F	R	D	P	N	S	E	E	N	S	N	D	I	A	L	V	H	L	S	S	P	L	P	L	T	E	Y	I	Q	P	V	C	L	P	A	A	G	Q	A	L	V	D	G	K	I	C	T	V	T	G	W	G	N	T	Q	Y	Y	G	Q	Q	A	G	V	L	Q	E	A	R	V	P	I	I	S	N	D	V	C
Template Known Secondary structure			G	G	G	T		T	T					T	T								S	S						S	S					B				T	T					T	T								S	S	B	S	S	T	T	S		B		S	B
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
			177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.																	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence		.																	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		.	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	.	.	.	.	.	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	.	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K
Query Conservation		.																	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence		.																	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	A	D	F	Y	G	N	Q	I	K	P	K	M	F	C	A	G	Y	P	E	G	G	I	D	A	C	Q	G	D	S	G	G	P	F	V	C	E	D	S	I	S	R	T	P	R	W	R	L	C	G	I	V	S	W	G	T	G	C	A	L	A	Q	K	P	G	V	Y	T	K	V	S	D	F	R	E	W	I	F	Q
Template Known Secondary structure		T	S	T	T	T	T	T	T				T	T					S		T	T		S		B			T	T		T	T									T	T	S	S													S	S	S	S		T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		244	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	D	K	L	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	T	H	S	E
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions