Job Description P0AEE3 Confidence 93.46% Date Thu Jan 5 11:23:07 GMT 2012 Rank 370 Aligned Residues 182 % Identity 18% Template c1ym0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:fibrinotic enzyme component b; PDBTitle: crystal structure of earthworm fibrinolytic enzyme component b: a2 novel, glycosylated two-chained trypsin Resolution 2.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	.	.	.	.	.	.	.	.	.	.	.	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	Q	V	S	V	R	R	.	.	.	.	.	.	.	.	.	K	S	S	D	S	H	F	C	G	G	S	I	I	N	D	R	.	W	V	V	C	A	A	H	C	M	Q	G	E	A	P	A	L	V	S	L	V	V	G	E	H	D	S	S	A	A	S	T	V	R	Q	T	H	D	V	D	S	I	F	V	N	E	N
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.	G	G	G	T											T	T	.										T	T			G	G	G						S		S	B	T	T	S			S	S													T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		28	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		125								.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.												.	.	.	180	.	.
Predicted Secondary structure			.	.	.	.	.	.	.								.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.								.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	D	L	A	V	L	K	I	.	.	.	.	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.	.	.	.	.	.	G	R	I	G	L	N
Query Conservation			.	.	.	.	.	.	.								.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.								.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	P	A	T	L	E	N	D	V	S	V	I	K	T	A	V	A	I	T	F	D	I	N	V	G	P	I	C	A	P	D	P	A	N	D	Y	V	Y	R	K	S	Q	C	S	G	W	G	T	I	N	S	G	G	V	C	C	P	A	V	L	R	Y	V	T	L	N	I	T	T	N	A	F	C	D	A	V	Y	T	S
Template Known Secondary structure				T	T	T		T	T								S	S					S	S	S					B				T	T				T	T								S			S	S	T	T			S			S	B																			T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure														.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence														.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		P	T	G	R	Q	N	F	L	Q	T	D	A	.	.	.	.	.	.	.	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	.	.	.	.	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D
Query Conservation														.	.	.	.	.	.	.																		.	.	.	.
Alig confidence														.	.	.	.	.	.	.																		.	.	.	.																.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		D	T	I	Y	D	D	M	I	C	A	T	D	N	T	G	M	T	D	R	D	S	C	Q	G	D	S	G	G	P	L	S	V	K	D	G	S	G	I	F	S	L	V	G	I	V	S	W	G	I	G	C	A	S	G	Y	.	.	.	.	.	P	G	V	Y	S	R	V	G	F	H	A	G	W	I	T	D	T	I	T	N
Template Known Secondary structure		S				T	T							S	S		S	S	S		B			T	T	T	T	T								T	T													S	S	S	S	S	S	S	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions