Job Description P0AEE3 Confidence 97.33% Date Thu Jan 5 11:23:07 GMT 2012 Rank 315 Aligned Residues 177 % Identity 16% Template c1ybwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hepatocyte growth factor activator precursor; PDBTitle: protease domain of hgfa with no inhibitor Resolution 2.70 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																	.	.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	.	.	.	.	Q	I	I	V	A	L	Q	D	.	.	.	.	.	.	.	.	.	G	R	V	F	E	A	L	L	V	G	S	D
Query Conservation																																																	.	.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.														.														.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		P	W	L	A	A	I	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S	F	C	A	G	S	L	V	H	T	C	.	W	V	V	S	A	A	H	C	F	S	H	S	P	P	R	D	S	V	S	V	V	L	G	Q	H	F	F	N	R	T	T	D	V	T	Q	T	F	G	I	E	K	Y	I	P	Y	T
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	T	.						G	G	G	T	T	T				G	G	G						S			B	T	T				S	S													T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		420	.	.	.	.	.	.	.													.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		123	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	T	D	.	.	.	.	.	.	.	L	A	V	L	K	I	N	A	T	G	G	L	.	.	.	.	.	.	.	.	.	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	S	V	F	N	P	S	D	H	D	L	V	L	I	R	L	K	K	K	G	D	R	C	A	T	R	S	Q	F	V	Q	P	I	C	L	P	E	P	G	S	T	F	P	A	G	H	K	C	Q	I	A	G	W	G	H	L	D	E	N	V	S	G	Y	S	S	S	L	R	E	A	L	V	P	L	V	A	D	H	K
Template Known Secondary structure		T		B	T	T	B		S	T	T										S	S	S			S			S	S	S					B				T	T					T	T								S			S	S	S	S	S		S			S	B								B
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
				177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.	.	.	.																.	.	.
Query SS confidence		.	.																				.	.	.	.	.																.	.	.
Query Sequence		.	.	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	.	.	.	.	.	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D
Query Conservation		.	.																				.	.	.	.	.																.	.	.
Alig confidence		.	.																				.	.	.	.	.																.	.	.																		.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		C	S	S	P	E	V	Y	G	A	D	I	S	P	N	M	L	C	A	G	Y	F	D	C	K	S	D	A	C	Q	G	D	S	G	G	P	L	A	C	E	K	N	G	V	A	Y	L	Y	G	I	I	S	W	G	D	G	C	G	R	L	H	K	.	.	.	.	P	G	V	Y	T	R	V	A	N	Y	V	D	W	I	N
Template Known Secondary structure				S	T	T	T	T	T	T	S	S		T	T					S		S	S	S	S	S	B			T	T	T	T	T								T	T														T	T	T	S	S	S	.	.	.	.							G	G	G	G
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.					.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		247	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		643	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions