Job Description P0AEE3 Confidence 94.22% Date Thu Jan 5 11:23:07 GMT 2012 Rank 367 Aligned Residues 139 % Identity 15% Template c1wqsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3c-like protease; PDBTitle: crystal structure of norovirus 3c-like protease Resolution 2.80 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	.	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L
Query Conservation																							.
Alig confidence													.										.										.	.	.	.	.	.	.
Template Conservation													.																				.	.	.	.	.	.	.
Template Sequence		G	S	G	W	G	F	W	V	S	P	T	.	V	F	I	T	T	T	H	V	I	P	T	G	V	R	E	F	F	G	E	.	.	.	.	.	.	.	P	I	E	S	I	A	I	H	R	A	G	E	F	T	Q	F	R	F	S	R	K	V	R	P	D	L	T	G	M	V	L	E	E	G	C	P	E	G	V	V	C	S
Template Known Secondary structure		S	S	S					S	S	S	S	.						G	G	G	S		S	S		S	B	S	S	S	S	.	.	.	.	.	.	.	B	G	G	G	S						T	T							S	S		S		T	T								S	S			T	T
Template Predicted Secondary structure													.																				.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		157	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure												.	.	.																										.	.	.	.	.	.	.																.	.	.
Query SS confidence												.	.	.																										.	.	.	.	.	.	.																.	.	.
Query Sequence		A	I	G	N	P	Y	N	L	G	Q	.	.	.	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	.	.	.	.	.	.	.	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	.	.	.	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S
Query Conservation												.	.	.																										.	.	.	.	.	.	.																.	.	.
Alig confidence												.	.	.																										.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		I	L	I	K	R	D	S	G	E	L	L	P	L	A	V	R	M	G	A	I	A	S	M	K	I	Q	G	R	L	V	H	G	Q	S	G	M	L	L	T	G	A	N	A	K	G	M	D	L	G	T	L	P	G	D	C	G	A	P	Y	V	Y	K	R	N	N	D	W	V	V	C	G	V	H	A	A	A	T	K	S	G
Template Known Secondary structure							S	S	S																	G	G	G	S										S	S	S	S			S	S	S		S	S			T	T		T	T								S	S	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		224
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		165

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions