Job Description P0AEE3 Confidence 99.70% Date Thu Jan 5 11:23:07 GMT 2012 Rank 43 Aligned Residues 172 % Identity 20% Template c1wczA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glutamyl endopeptidase; PDBTitle: crystal structure of an alkaline form of v8 protease from2 staphylococcus aureus Resolution 2.00 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110									.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																	.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	.	.	.	.	Q	I	I	V	A	L	Q	D	.	.	.	.	.	.	.	.	G	R	V	F	E	A	L	L	V	G	S	D	S
Query Conservation																																																	.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																	.														.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																	.
Template Sequence		A	P	V	T	Y	I	Q	V	.	.	.	.	.	.	.	.	.	E	A	T	G	T	F	I	A	S	G	V	V	V	G	K	D	.	T	L	L	T	N	K	H	V	V	D	A	T	H	G	D	P	H	A	L	K	A	F	P	S	A	I	N	Q	D	N	Y	P	N	G	G	F	T	A	E	Q	I	T	K	Y	S	G
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.														S	S	S	.										G	G	G	T	T		G	G	G						T			B	T	T	B		T	T												S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		L	T	D	L	A	V	L	K	I	N	A	T	G	G	.	.	.	.	.	.	.	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		E	G	D	L	A	I	V	K	F	S	P	N	E	Q	N	K	H	I	G	E	V	V	K	P	A	T	M	S	N	N	A	E	T	Q	V	N	Q	N	I	T	V	T	G	Y	P	G	D	K	P	V	A	T	M	W	E	S	K	G	K	I	T	Y	L	K	G	E	A	.	.	.	.	.	.	M	Q	Y	D	L	S	T
Template Known Secondary structure		S	S											T	T	S							S					B				S	S			T	T										T	T	S	S	T	T														T	T		.	.	.	.	.	.				S	B
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	.	Q	L	A	T	K	I	M	D	K	L	I	R	D
Query Conservation																																												.
Alig confidence																												.	.	.	.	.	.	.	.									.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		T	G	G	N	S	G	S	P	V	F	N	E	K	N	E	V	I	G	I	H	W	G	G	V	P	N	.	.	.	.	.	.	.	.	E	F	N	G	A	V	F	I	N	E	N	V	R	N	F	L	K	Q	N	I	E	D
Template Known Secondary structure			T	T		T	T						T	T	S											T	T	.	.	.	.	.	.	.	.	T																				T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions