Job Description P0AEE3 Confidence 98.76% Date Thu Jan 5 11:23:07 GMT 2012 Rank 166 Aligned Residues 90 % Identity 17% Template c1w9qB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the pdz tandem of human syntenin in2 complex with tnefaf peptide Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		R	V	I	R	G	Y	I	G	I	G	G	R	E	I	A	P	L	H	A	Q	G	G	G	I	D	Q	L	Q	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	I	.	.	S	A	L	E	T	M	D	Q	V	A	E	I	R	P	G	S	V
Query Conservation																																																															.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																																					.	.												.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Sequence		K	D	Q	D	G	K	I	G	L	R	L	K	S	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N	G	I	F	V	Q	L	V	Q	A	N	S	P	A	S	L	V	G	L	R	F	G	D	Q	V	L	Q	I	N	G	E	N	C	A	G	W	S	S	D	K	A	H	K	V	L	K	Q	.	A	F	G	E	K
Template Known Secondary structure				T	T	S									.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T	S					T	T			T	T							T	T				T	T													.		S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																																		.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	V	V	M	R	D	D	K	Q	L	T	L	Q	V	T	I	Q	E	Y	P	A	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	M	T	I	R	D	R	P	F	E	R	T	I	T	M	H	K	D	S	T	G	H	V	G
Template Known Secondary structure										T	T										T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions