Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.59%DateThu Jan 5 11:23:07 GMT 2012
Rank304Aligned Residues93
% Identity20%Templatec1uhbA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trypsin; PDBTitle: crystal structure of porcine alpha trypsin bound with auto2 catalyticaly produced native peptide at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110 .........120.....
Predicted Secondary structure 























.......





...
Query SS confidence 






















































. . . . . . .














. . .
Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQD. . . . . . . GRVFEALLVGSDSLT. . .
Query Conservation   


 
                  


 

   
 


  


       
   
.......
    
 
   
   ...
Alig confidence 






............













.




















.......














...
Template Conservation 
  
 
 ............     






  . 






                                      
Template Sequence  PYQVSLN. . . . . . . . . . . . SGSHFCGGSLINSQ. WVVSAAHCYKSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNFNGN
Template Known Secondary structure  TT............SSS
SSS.
GGG

SS
S
S
TTS

S


TT

TT
Template Predicted Secondary structure 

............





.


















Template SS confidence 















































































   28.30.... .....40........ .50.........60.........70.........80.........90....
 
   126...130.... .....140.........150.........160..
Predicted Secondary structure  ....


....


















Query SS confidence  . . . .








. . . .



























Query Sequence  . . . . DLAVLKINA. . . . TGGLPTIPINARRVPHIGDVVLAIGNPY
Query Conservation  ....






  ....                 
  
 


 
 
Alig confidence  ....








....












.













Template Conservation      




 
         
 

 
    .        
 


 
Template Sequence  TLDNDIMLIKLSSPATLNSRVATVSLPRSC. AAAGTECLISGWGN
Template Known Secondary structure  T
TT

SS



SSSS





SS
.

TT






SS
Template Predicted Secondary structure 

















.





Template SS confidence 












































   98.100.........110.........120....... ..130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions