Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE3
Confidence97.49%DateThu Jan 5 11:23:07 GMT 2012
Rank307Aligned Residues179
% Identity21%Templatec1q3xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:mannan-binding lectin serine protease 2; PDBTitle: crystal structure of the catalytic region of human masp-2
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90........ .100.........110 .........120....
Predicted Secondary structure 

















....





.......




Query SS confidence 










































. . . .











. . . . . . .













Query Sequence  PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVI. . . . NDADQIIVALQD. . . . . . . GRVFEALLVGSDSL
Query Conservation   


 
                  


 

   
 


  


....       
   
.......
    
 
   
  
Alig confidence 






.............












.








....











.......













Template Conservation 

 
 
 .............    






  . 







         
 
                         
Template Sequence  PWQVLIL. . . . . . . . . . . . . GGTTAAGALLYDN. WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEG
Template Known Secondary structure  TT
.............SSSSTTT.
TTT


S
SBTT
S
S
TT
Template Predicted Secondary structure 

.............





.


















Template SS confidence 















































































   457..460... ......470...... ...480.........490.........500.........510.........520..
 
   125 ....130... ......140.........150.........160.........170......
Predicted Secondary structure 
........

.......























.............
Query SS confidence 
. . . . . . . .







. . . . . . .










































. . . . . . . . . . . . .
Query Sequence  T. . . . . . . . DLAVLKIN. . . . . . . ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISAT. . . . . . . . . . . . .
Query Conservation   ........






 .......                  
  
 


 
         
 

  .............
Alig confidence 
........







.......










































.............
Template Conservation                                                                
            
    
Template Sequence  YTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAY
Template Known Secondary structure 

TTS

TT

SS



BTTB


B


GGGGGGSSTT
SS

TTSS

SB

T
Template Predicted Secondary structure 



















































Template SS confidence 















































































   523......530.........540.........550.........560.........570.........580.........590.........600..
 
   177..180.........190.. .......200.........210 .........220.........230.........240.....
Predicted Secondary structure  .











.....










.....









Query SS confidence  .















. . . . .

















. . . . .


































Query Sequence  . GRIGLNPTGRQNFLQT. . . . . DASINHGNSGGALVNSLG. . . . . ELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIM
Query Conservation  . 
           
  .....

 
  
 




 
  
..... 



                   


   
    
Alig confidence  .















.....

















.....

















...













Template Conservation                          
 
 







          
 

 
 
   
     ...
 




  
  

Template Sequence  EKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQ. . . YGVYTKVINYIPWI
Template Known Secondary structure  SSTTS
TT
S
TT

SS

SB

TT
TT
TTTT

SSTT
TT
...
GGGG
Template Predicted Secondary structure 










































...
Template SS confidence 















































































   603......610.........620.........630.........640.........650.........660..... ....670.........
 
   246...250.
Predicted Secondary structure 


Query SS confidence 





Query Sequence  DKLIRD
Query Conservation    
   
Alig confidence 





Template Conservation     
  
Template Sequence  ENIISD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   680.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions