Job Description P0AEE3 Confidence 100.00% Date Thu Jan 5 11:23:07 GMT 2012 Rank 7 Aligned Residues 295 % Identity 30% Template c1lcyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:htra2 serine protease; PDBTitle: crystal structure of the mitochondrial serine protease htra2 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	D	S	T	D	E	T	P	A	S	Y	N	L	A	V	R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		P	P	A	S	P	R	S	Q	Y	N	F	I	A	D	V	V	E	K	T	A	P	A	V	V	Y	I	E	I	L	D	.	R	H	P	F	L	G	R	E	V	P	I	S	N	G	S	G	F	V	V	A	A	D	G	L	I	V	T	N	A	H	V	V	A	D	R	R	R	V	R	V	R	L	L	S	G	D	T	Y	E
Template Known Secondary structure										S											G	G	G									.			T	T	T	T															T	T	T										T	T		S							T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		A	V	V	T	A	V	D	P	V	A	D	I	A	T	L	R	I	Q	T	K	E	P	L	P	T	L	P	L	G	R	S	A	D	V	R	Q	G	E	F	V	V	A	M	G	S	P	F	A	L	Q	N	T	I	T	S	G	I	V	S	S	A	Q	R	.	.	.	.	.	.	P	N	V	E	Y	I	Q	T	D	A	A
Template Known Secondary structure									T	T	T	T									S	S							B			G	G	G			T	T									T	T	S	S	S	S							B		S		S		.	.	.	.	.	.									S	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G	R	V	I	R	G	Y	I	G	I	G	G	R	E	I	A	P	L	H	A	Q	G	G	G
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation																													.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		I	D	F	G	N	A	G	G	P	L	V	N	L	D	G	E	V	I	G	V	N	T	M	K	V	T	A	.	.	.	.	.	.	.	.	G	I	S	F	A	I	P	S	D	R	L	R	E	F	L	H	R	R	Y	I	G	V	M	M	L	T	L	S	P	S	I	L	A	E	L	.	.	.	Q	L	R	E	P	S	F
Template Known Secondary structure			S	T	T	T	T	T	S					T	T	S												T	.	.	.	.	.	.	.	.	T														T																					.	.	.	T	T	S		T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Q	L	Q	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	I	S	A	L	E	T	M	D	Q	V	A	E	I	R	P	G	S	V	I	P	V	V	V	M	R	D	D	K	Q	L	T	L	Q	V	T	I	Q	E	Y
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		P	D	V	Q	H	G	V	L	I	H	K	V	I	L	G	S	P	A	H	R	A	G	L	R	P	G	D	V	I	L	A	I	G	E	Q	M	V	Q	N	A	E	D	V	Y	E	A	V	.	.	.	R	T	Q	S	Q	L	A	V	Q	I	R	R	G	R	E	T	L	T	L	Y	V	T	P	E	V	T
Template Known Secondary structure					S	S									T	T	S						T			T	T							T	T					S									.	.	.	T	T		S	S								T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions