 |
Job Description | P0AEE3 | Confidence | 89.05% | Date | Thu Jan 5 11:23:07 GMT 2012 |
Rank | 378 | Aligned Residues | 27 |
% Identity | 22% | Template | c1kxfA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:sindbis virus capsid protein; |
PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii)
|
Resolution | 2.38 Å |
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | N | S | G | G | A | L | V | N | S | L | G | E | L | M | G | I | N | T | L | S | F | D | K | S | N |
Query Conservation |   |
  |
|   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
Template Sequence |   |
R | G | D | S | G | R | P | I | M | D | N | S | G | R | V | V | A | I | V | L | G | G | A | D | E | G | T |
Template Known Secondary structure |   |
T | T |
| T | T |
|  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|