Job Description P0AEE3 Confidence 98.02% Date Thu Jan 5 11:23:07 GMT 2012 Rank 281 Aligned Residues 169 % Identity 24% Template c1gpzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:complement c1r component; PDBTitle: the crystal structure of the zymogen catalytic domain of2 complement protease c1r Resolution 2.9 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	G	R	V	F	E	A	L	L	V	G	S	D
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.														.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		P	W	Q	V	F	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	G	R	G	G	G	A	L	L	G	D	R	.	W	I	L	T	A	A	H	T	L	Y	P	K	E	H	Q	S	N	A	S	L	D	V	F	L	G	H	T	N	V	E	E	L	M	K	L	G	N	H	P	I	R	R	V	S	V	H
Template Known Secondary structure		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S								T	T	T	.						G	G	G	T	S		S					S								S		S	S							T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		459	460	.	.	.	.	.														.	.	.	.	470	.	.	.	.	.	.	.	.		.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		123	.	.											.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		S	L	T	.	.	.	.	.	.	.	.	.	.	D	L	A	V	L	K	I	N	.	.	.	.	.	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																																															.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		P	D	Y	R	Q	D	E	S	Y	N	F	E	G	D	I	A	L	L	E	L	E	N	S	V	T	L	G	P	N	L	L	P	I	C	L	P	D	N	D	T	F	Y	D	L	G	L	M	G	Y	V	S	G	F	G	I	A	H	D	L	R	F	V	R	L	P	V	A	N	P	Q	A	C	.	.	.	.	.	.	E	Q
Template Known Secondary structure		T	T			S	S		S	S			T	T								S	S					B	T	T	B				B				S	S	S				T	T													S											G	G	G	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.							.	600
		188	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure							.	.	.	.	.																			.	.	.	.	.
Query SS confidence							.	.	.	.	.																			.	.	.	.	.
Query Sequence		N	F	L	Q	T	.	.	.	.	.	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R
Query Conservation							.	.	.	.	.																			.	.	.	.	.
Alig confidence							.	.	.	.	.																			.	.	.	.	.																.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		N	M	F	C	A	G	H	P	S	L	K	Q	D	A	C	Q	G	D	S	G	G	V	F	A	V	R	D	P	N	T	D	R	W	V	A	T	G	I	V	S	W	G	I	G	C	S	R	G	.	.	.	.	.	.	Y	G	F	Y	T	K	V	L	N	Y	V	D	W	I	K	K	E	M	E
Template Known Secondary structure									G	G	G	T	T	G	G	G	G	S		S	S								T	T	T													T	T	T	T	T	T	.	.	.	.	.	.							G	G	G	G								T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.							.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions