Job Description P0AEE3 Confidence 97.19% Date Thu Jan 5 11:23:07 GMT 2012 Rank 320 Aligned Residues 182 % Identity 15% Template c1ghwH_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: H: PDB Molecule:thrombin; PDBTitle: a novel serine protease inhibition motif involving a multi-centered2 short hydrogen bonding network at the active site Resolution 1.75 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	N	V	Y	N	R	G	L	N	T	N	S	H	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	W	Q	V	M	L	F	R	.	.	.	.	.	.	.	.	.	K	S	P	Q	E	L	L	C	G	A	S	L	I	S	D	R	.	W	V	L	T	A	A	H	C	L	L	Y	P	P	W	D	K	N	F	T	E	N	D	L	L	V	R	I	G	K	H	S	R	T	R	Y	E	R	N	I	E	K	I	S	M	L	E
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.	T	T	T	T										S	S	S	.						G	G	G	T			G	G	G	T					G	G	G						S			B	S	S	S			T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		28	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		117	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.										.	.	.	.	.	.	.																																													.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.										.	.	.	.	.	.	.																																													.	.	.	.	.	.
Query Sequence		L	L	V	G	S	D	S	.	.	.	.	.	.	.	L	T	D	L	A	V	L	K	I	.	.	.	.	.	.	.	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.										.	.	.	.	.	.	.																																													.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.										.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	Y	I	H	P	R	Y	N	W	R	E	N	L	D	R	D	I	A	L	M	K	L	K	K	P	V	A	F	S	D	Y	I	H	P	V	C	L	P	D	R	E	T	A	A	S	L	L	Q	A	G	Y	K	G	R	V	T	G	W	G	N	L	K	E	T	G	Q	P	S	V	L	Q	V	V	N	L	P	I	V	E
Template Known Secondary structure							T	T		B	T	T	T	T		B	T								S	S						S	S					B													T	T								S			S	S						S	B								B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
													177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	.	.	.	.	.	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence		R	P	V	C	K	D	S	T	R	I	R	I	T	D	N	M	F	C	A	G	Y	K	P	D	E	G	K	R	G	D	A	C	E	G	D	S	G	G	P	F	V	M	K	S	P	F	N	N	R	W	Y	Q	M	G	I	V	S	W	G	E	G	C	D	R	D	G	K	Y	G	F	Y	T	H	V	F	R	L	K	K	W
Template Known Secondary structure							T	T		S	S				T	T								G	G	G	S				B			T	T		T	T								T	T	T													S	S	S	S		T	T								T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		241	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	K	I	M	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	K	V	I	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions