Job Description P0AEE3 Confidence 98.55% Date Thu Jan 5 11:23:07 GMT 2012 Rank 241 Aligned Residues 166 % Identity 14% Template c1elvA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement c1s component; PDBTitle: crystal structure of the catalytic domain of human complement c1s2 protease Resolution 1.70 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.								.
Predicted Secondary structure																																			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																																			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		L	G	S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	.	.	.	R	V	F	E	A	L	L	V	G	S	D	S	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	V	L	K	I	N	.	.	.	.	.	.	.	A
Query Conservation																																			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence												.																							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		W	A	G	G	A	L	I	N	E	Y	.	W	V	L	T	A	A	H	V	V	E	G	N	R	E	P	T	M	Y	V	G	S	T	S	V	Q	K	M	L	T	P	E	H	V	F	I	H	P	G	W	K	L	L	A	V	P	E	G	R	T	N	F	D	N	D	I	A	L	V	R	L	K	D	P	V	K	M	G	P	T
Template Known Secondary structure										T	T	.										T	T		S	S						S		S	B														T	T	S				S	S		T	T					T	T								S	S					B	T	T
Template Predicted Secondary structure												.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	.	.	.	.	.	.	.	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	.	.	.	.	A	S	I	N	H	G	N	S	G	G
Query Conservation																																	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	S	P	I	C	L	P	G	T	S	S	D	Y	N	L	M	D	G	D	L	G	L	I	S	G	W	G	R	T	E	K	R	D	R	A	V	R	L	K	A	A	R	L	P	V	A	P	L	R	K	C	K	E	V	A	Y	V	F	T	P	N	M	I	C	A	G	G	E	K	G	M	D	S	C	K	G	D	S	G	G
Template Known Secondary structure		B				B				S	S	G	G	G				T	T								S				S	S		S	S		S	B																T							T	T							S	T	T		B			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
		204	.	.					.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure					.	.	.	.						.	.
Query SS confidence					.	.	.	.						.	.
Query Sequence		A	L	V	.	.	.	.	N	S	L	G	E	.	.	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G
Query Conservation					.	.	.	.						.	.
Alig confidence					.	.	.	.						.	.														.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		A	F	A	V	Q	D	P	N	D	K	T	K	F	Y	A	A	G	L	V	S	W	G	P	Q	C	G	T	.	.	.	.	.	.	.	Y	G	L	Y	T	R	V	K	N	Y	V	D	W	I	M	K	T	M	Q	E	N
Template Known Secondary structure								S	S		T	T												S	S	T	T	S	.	.	.	.	.	.	.							G	G	G	G											T
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.								.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions