Job Description P0AEE3 Confidence 95.04% Date Thu Jan 5 11:23:07 GMT 2012 Rank 361 Aligned Residues 119 % Identity 17% Template c1cu1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus Resolution 2.50 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.																.
Query SS confidence																																																							.																.
Query Sequence		S	G	V	I	M	D	Q	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A	L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	.	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	.	P	H	I	G	D	V	V	L	A	I
Query Conservation																																																							.																.
Alig confidence																									.	.	.										.	.	.																.																.
Template Conservation																									.	.	.										.	.	.
Template Sequence		S	F	L	A	T	C	V	N	G	V	C	W	T	V	Y	H	G	A	G	S	K	T	L	.	.	.	A	G	P	K	G	P	I	T	Q	.	.	.	M	Y	T	N	V	D	Q	D	L	V	G	W	Q	A	P	P	G	A	R	S	L	T	P	C	T	C	G	S	S	D	L	Y	L	V	T	R	H	A	D	V	I	P
Template Known Secondary structure									T	T										T	T			B	.	.	.		B	T	T	S		B			.	.	.	S				T	T	T	T								T	T						B			S			S							T	T	S
Template Predicted Secondary structure																									.	.	.										.	.	.
Template SS confidence
		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.				.	.	.	.	.	1070	.	.	.				.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q	N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	R	R	G	D	S	R	G	S	L	L	S	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	S	Y	L	K	G	S	S	G	G	P	L	L	C	P	S	G	H	A	V	G	I	F	R	A	A	V	C	T	R	G
Template Known Secondary structure						S	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		T	T						T	T	S													T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1116	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130																				.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions