|   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | E | K | M | A | D | D | N | N | F | S | . |
. |
. |
. |
F | N | F | C | H | T | F | F | Y | D | R | N | I | I | E | S | I | R | K | F | T | S | S | L | V | A | P | F | V | R | D | Y | Q | L | Y | V | E | N | Q | H | D | P | E | P | A | V | F | R | P | V | S | R | K | I | F | I | V | H | G | H | D | N | D | A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
Template Sequence |   |
Y | I | S | Q | M | E | D | A | G | S | I | P | E | G | K | L | V | I | H | T | N | T | P | S | Y | V | G | S | H | V | T | G | F | A | N | M | V | Q | G | I | V | N | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | N | T | G | A | K | N | G | K | I | N | V | I | P | G | F | V | G | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
| S |
| T | T |
|  |  |  |  |  |
|
|
| T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| S |
|
|
| S |
|  |  |  |  |
|
| S |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
|
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
L | Q | S | V | A | R | F | I | S | R | I | G | L | E | E | I | I | L | S | E | R | P | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | R | T | I | I | E | K | F | E | A | E | S | G | D | V | S | F | A | I | V | L |
Query Conservation |   |
. |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   | . |   |   |
|   |   |
|
|
|   |
Template Sequence |   |
D | M | R | E | I | K | R | L | F | E | A | M | D | I | P | Y | I | M | F | P | D | T | S | G | V | L | D | G | P | T | T | G | E | Y | K | M | Y | P | E | G | G | T | K | I | E | D | L | K | D | T | . |
G | N | S | D | L | T | L | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | S | S |
|
| T | T | T | S | S |
|
|
|
| S | S |
|
| S | S |
| S |
| S | B |
|  |  |  |  |  | T | T | . | S | S |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
. | . | . | . | . | . | . | 240 | . |
  |