Job Description Q9JMR6 Confidence 97.20% Date Thu Jan 5 12:37:50 GMT 2012 Rank 2 Aligned Residues 122 % Identity 16% Template d1fyva_ SCOP info Flavodoxin-like Toll/Interleukin receptor TIR domain Toll/Interleukin receptor TIR domain Resolution 2.90

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		154	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		I	F	I	V	H	G	H	D	N	D	.	.	A	L	Q	S	V	A	R	F	I	S	R	I	G	L	E	E	I	I	L	S	E	R	P	D	G	S	R	T	I	I	E	K	F	E	A	E	S	G	D	V	S	F	A	I	V	L	M	T	P	D	D	S	G	S	A	L	A	S	E	S	T	R	L	R	A	R	Q	N
Query Conservation												.	.
Alig confidence												.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	I	S	Y	S	G	H	D	S	F	W	V	K	N	E	L	L	P	N	L	E	K	E	G	X	Q	I	C	L	H	E	R	N	F	V	P	G	K	S	I	V	E	N	I	I	T	C	I	E	K	S	Y	K	S	I	F	V	L	S	P	N	F	V	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	E	W
Template Known Secondary structure								G	G	G							T							T	T	T						T	T	T	T			T	T	S																					S							.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.													.	.
		232	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	Y	E	L	G	Y	F	A	G	K	.	.	.	L	G	R	G	K	V	L	V	L	R	K	G	D	I	E	I	P	S	D	L	A	G	V	.	.	.	.	.	.	.	.	.	.	L	Y	T	E	L	D	E	H	G	G	W	K	R	K	L	L	S	E	L	A	Y	A
Query Conservation													.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	H	Y	E	L	Y	F	A	H	H	N	L	F	H	E	G	S	N	S	L	I	L	I	L	L	E	P	I	P	Q	Y	S	I	P	S	S	Y	H	K	L	K	S	L	X	A	R	R	T	Y	L	E	W	P	K	E	K	S	K	R	G	L	F	W	A	N	L	R	A	A
Template Known Secondary structure								T	T	S				S		S	S		S	S						S	S				G	G	G	S		T	T										T								S	S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions