Job Description Q9JMR6 Confidence 12.84% Date Thu Jan 5 12:37:50 GMT 2012 Rank 74 Aligned Residues 64 % Identity 17% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	R	K	I	F	I	V	H	G	H	D	N	D	A	L	Q	S	V	A	R	F	I	S	R	I	G	L	E	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	S	E	R	P	D	G	S	R	T	I	I	E	K	F	E	A	E	S	G	D	V	S	F	A	I	V	L	M
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		M	R	Q	R	I	L	V	V	D	.	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L
Template Known Secondary structure											.	S															T	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		211	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	K	T
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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