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Job DescriptionQ9JMR6
Confidence97.44%DateThu Jan 5 12:37:50 GMT 2012
Rank1Aligned Residues120
% Identity18%Templatec3h16A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tir protein; PDBTitle: crystal structure of a bacteria tir domain, pdtir from2 paracoccus denitrificans
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.... .160... ......170.........180.........190.........200.........210.........220.........230.
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Query Sequence  IFIVH. GHDND. ALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQN
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Template Sequence  IFISHAWEDKADFVEALAHTLRAAGAEVWYDDFSLRPGDSLRRSIDKGLGSSRFGIVVLSTHFFK. . . . . . . . . . . . KEW
Template Known Secondary structure  GGGTTTTT


GGG
TT

TST............T

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   168.170.........180.........190.........200.........210.........220.........230.. ...
 
   232.......240... ......250....... ..260.........270........ .280.....
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Query Sequence  VLYELGYFAGKL. . GRGKVLVLRKGDIE. . . . . IPSDLAGVLYTELDEHGGWKR. . KLLSELA
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Template Sequence  PQKELDGLFQLESSGRSRILPIWHKVSKDEVASFSPTMADKLAFNTSTKSVDEIVADLMAIIR
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   236...240.........250.........260.........270.........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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