 |
Job Description | P21889 | Confidence | 93.46% | Date | Thu Jan 5 11:38:40 GMT 2012 |
Rank | 112 | Aligned Residues | 78 |
% Identity | 14% | Template | d2g4ca2 |
SCOP info | Class II aaRS and biotin synthetases
| Class II aaRS and biotin synthetases
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
|
Resolution | 3.15 |
|
 |
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Y | Y | Q | I | V | K | C | F | R | D | E | D | L | R | A | D | R | Q | P | E | F | T | Q | I | D | V | E | T | S | F | M | T | A | P | Q | V | R | E | V | M | E | A | L | V | R | H | L | W | L | E | V | K | G | V | D | L | G | D | F | P | V | M | T | F | A | E | A | E | R | R | Y | G | S | D | K | P | D | L | R |
Query Conservation |   |
|
|
|
|
|   |   |   |
|
|   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
|
|
|
| . | . | . | . |   |
|
|
|
|
|   |
|   |
|   |
|   |
| . |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|
|
Template Sequence |   |
G | L | A | Q | I | G | V | C | F | H | P | V | . |
. |
. |
. |
K | S | I | G | E | K | T | E | A | S | L | V | W | F | . |
T | P | P | R | T | S | N | Q | W | L | D | F | W | L | R | H | R | L | Q | W | W | R | K | . |
F | A | M | S | P | S | N | F | S | S | S | D | C | Q | D | E | E | G | R | K | G | N | K | L | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S |
| G | G | G |  |  |  |  |
|
|
|
| S | S | S | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |
  |   |
288 | . | 290 | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
N | P | M | E |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |
|
Template Sequence |   |
Y | N | F | P |
Template Known Secondary structure |   |
 |  |  | T |
Template Predicted Secondary structure |   |
 |  |
|
|
Template SS confidence |   |
|
|
|
|
  |   |
291 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|