Job Description P21889 Confidence 63.16% Date Thu Jan 5 11:38:40 GMT 2012 Rank 138 Aligned Residues 88 % Identity 18% Template d1qvca_ SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.		.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	T	L	C	G	W	V	N	.	.	.	.	.	R	R	R	D	L	G	S	.	L	I	F	I	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R
Query Conservation											.	.	.	.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																										.	.
Template Sequence		K	V	I	L	V	G	N	L	G	Q	D	P	E	V	R	Y	M	P	N	G	G	A	V	A	N	I	T	L	A	T	S	E	S	W	R	D	K	A	T	G	E	M	K	E	Q	T	E	W	H	R	V	V	L	F	G	K	.	.	L	A	E	V	A	S	E	Y	L	R	K	G	S	Q	V	Y	I	E	G	Q	L	R
Template Known Secondary structure										S	S								S	S	S															S			S	S	S	S														T		.	.											T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I	N	R	A	D	V
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		T	R	K	W	T	D	Q	S	G	Q	D	R	Y	T	.	T	E	V	V	V	N	V	G	G	T	M	Q	M	L	G	G
Template Known Secondary structure							S	S	S	S						.						T	T
Template Predicted Secondary structure																.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions