Job Description P21889 Confidence 99.95% Date Thu Jan 5 11:38:40 GMT 2012 Rank 32 Aligned Residues 270 % Identity 14% Template d1qe0a2 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.70

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D	R	Y	Y	Q	I	V	K	C
Query Conservation
Alig confidence																																																							.													.
Template Conservation																																																							.													.
Template Sequence		E	D	S	K	K	W	R	Y	I	E	N	Q	L	D	E	L	M	T	F	Y	N	Y	K	E	I	R	T	P	I	F	E	S	T	D	L	F	A	R	E	M	Y	T	F	K	D	K	G	D	R	S	I	T	L	.	R	P	E	G	T	A	A	V	V	R	S	Y	.	I	E	H	K	M	Q	G	N	P	N	Q	P	I
Template Known Secondary structure																						T								S																									.		S		S									.			T	T	G	G	G		S	S		S
Template Predicted Secondary structure																																																							.													.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.
		216	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		F	R	D	E	D	L	R	A	D	R	Q	P	.	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L	E	V	K	G	V	D	L	G	D	F	P	V	M	T	F	A	E	A	E	R	R	Y	G	S	D	K	P	D	L	R	N	P	M	E	L	T	D
Query Conservation														.
Alig confidence														.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	Y	Y	N	G	P	M	F	R	Y	Y	R	Q	F	N	Q	F	G	V	E	A	I	G	A	E	N	P	S	V	D	A	E	V	L	A	M	V	M	H	I	Y	Q	S	F	G	L	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																									S																					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	L	L	K	S	V	E	F	A	V	F	A	G	P	A	N	D	P	K	G	R	V	A	A	L	R	V	P	G	G	A	S	L	T	R	K	Q	I	D	E	Y	G	N	F	V	K	I	Y	G	A	K	G	L	A	Y	I	K	V	N	E	R	A	K	G	L	E	G	I	N	S	P	V	A	K	F	L	N	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	L	V	I	N	S	V	G	D	M	A	S	R	K	E	Y	N	E	A	L	V	K	H	F	E	P	V	I	H	E	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										G	G	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	E	D	I	L	D	R	T	A	A	Q	D	G	D	M	I	F	F	G	A	D	N	K	K	I	V	A	D	A	M	G	A	L	R	L	K	V	G	K	D	L	G	L	T	D	E	S	K	W	A	P	L	W	V	I	D	F	P	M	F	E	D	D	G	E	G	G	L	T	A	M	H	H	P	F	T	S	P
Query Conservation
Alig confidence		.	.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	D	C	Q	S	R	L	H	T	D	P	M	R	I	L	T	A	P	R	I	T	D	F	L	N	E	E	S	K	A	Y	Y	E	Q	V	K	A	Y	L	D	D	L	G	I	P	Y	T	E	D	P	N	L	V	R	G	L	D	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.						T	T	T	T		G	G	G	G						G	G	G				T	T																T							T	T						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.								.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.
Query Sequence		K	D	M	T	A	A	E	L	K	A	A	P	E	N	A	V	A	N	A	Y	D	M	V	I	N	G	Y	.	.	.	.	.	.	.	E	V	G	G	G	S	V	R	I	H	N	G	D	M	Q	Q	T	V	F	G	I	L	G	I	N	E	E	E	Q	R	E	K	F	G	F	L	L	D	A	L	K	Y	G	T	P	P
Query Conservation																													.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	T	A	F	E	L	M	M	D	N	P	N	Y	D	G	A	I	T	T	L	C	G	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	G	L	L	E	L	L	D	G	P	S	E	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S	T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																										.	290	.	.	.	.	.	.	.	.	.	300	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	L	A	F	G	L	D	R	L	T	M	L	L	T	G	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	G	F	A	L	S	I	E	R	L	L	L	A	L	E	E	E	G
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions