Return to main results Retrieve Phyre Job Id

Job DescriptionP21889
Confidence98.90%DateThu Jan 5 11:38:40 GMT 2012
Rank67Aligned Residues120
% Identity22%Templated1nj8a3
SCOP infoClass II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160......... 170.. .......180.... .....190.........200.....
Predicted Secondary structure 






....


.....





...










Query SS confidence 































. . . .


. . . . .











. . .




















Query Sequence  LKTRAKITSLVRRFMDDHGFLDIETPMLTKAT. . . . PEG. . . . . ARDYLVPSRVHK. . . GKFYALPQSPQLFKQLLMMSG
Query Conservation   
 

 
    
 

   




 



    .... 

.....
           ...   
 
 




 

 

  
Alig confidence 































....


.....











...




















Template Conservation    
   
           
   
  
 
          
        
                
 

 
          
Template Sequence  FKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLW
Template Known Secondary structure  TT




S
SSSGGGGGG

SSSS
SSSTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   206. ..210.........220.... .....230 .........240.........250.......
Predicted Secondary structure 

.......







...




.


Query SS confidence 

. . . . . . .
















. . .





.


























Query Sequence  FD. . . . . . . RYYQIVKCFRDEDLRAD. . . RQPEFT. QIDVETSFMTAPQVREVMEALVRHLWL
Query Conservation    .......




   

 
   
 ...
 



. 

 
 
      

   
 

  
  
Alig confidence 

.......
















...





.


























Template Conservation    
 
 




      

 
     

 
 


 

 
 
      
 
             
Template Sequence  VKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKK
Template Known Secondary structure 

BTTS





B



S

BTTTB
SB
S
SS
Template Predicted Secondary structure 


















Template SS confidence 






























































   114.....120.........130.........140.........150.........160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions