Job Description P21889 Confidence 71.18% Date Thu Jan 5 11:38:40 GMT 2012 Rank 132 Aligned Residues 96 % Identity 14% Template d1ltla_ SCOP info OB-fold Nucleic acid-binding proteins DNA replication initiator (cdc21/cdc54) N-terminal domain Resolution 3.00

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																															.									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	Y	C	G	Q	L	R	L	S	H	V	G	Q	Q	V	T	L	C	G	W	V	N	R	R	R	D	L	G	.	S	L	I	F	I	D	M	R	.	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.									.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	P	L	R	E	L	R	S	K	F	I	G	K	F	V	A	V	D	G	I	V	R	K	T	D	E	I	R	P	R	I	V	K	A	V	F	E	C	R	G	C	M	R	H	H	A	V	T	Q	S	T	N	M	I	T	E	P	S	L	C	S	E	C	G	G	R	S	F	R	L	L	Q	D	E	S	E	F	L	D
Template Known Secondary structure		B			G	G	G			G	G	G	T	T	S																										T	T	T									S	S	S	S					S			T	T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
																											55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R	A	R	D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		T	Q	T	L	K	L	Q	E	P	L	E	N	L	S	G	G	E	Q	P	R	Q	I	T	V	V	L	E	D	D	L	V	D	T	L	T	P	G	D	I	V	R	V	T	G	T	L	R	T	V	R	.	.	.	.	D	E	R	T	K	R	F	K	N	F	I	Y	G	N	Y	T	E	F	L
Template Known Secondary structure											S	T	T			S	S												G	G	G	T	T				T	T														.	.	.	.		T	T	T	T													B
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions