Job Description P21889 Confidence 100.00% Date Thu Jan 5 11:38:40 GMT 2012 Rank 15 Aligned Residues 346 % Identity 57% Template d1l0wa3 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.01

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		107	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		V	L	P	L	D	S	N	.	.	.	.	.	.	H	V	N	T	E	E	A	R	L	K	Y	R	Y	L	D	L	R	R	P	E	M	A	Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	E	G	A	R	D	Y	L	V	P	S
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	P	V	D	A	G	W	R	G	E	E	E	K	E	A	S	E	E	L	R	L	K	Y	R	Y	L	D	L	R	R	R	R	M	Q	E	N	L	R	L	R	H	R	V	I	K	A	I	W	D	F	L	D	R	E	G	F	V	Q	V	E	T	P	F	L	T	K	S	T	P	E	G	A	R	D	F	L	V	P	Y
Template Known Secondary structure		S	S			S	S	G	G	G	T														T					T	T	S																								T	T								S	S	B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L	E	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	E	P	G	L	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	M	L	M	V	A	G	L	D	R	Y	F	Q	I	A	R	C	F	R	D	E	D	L	R	A	D	R	Q	P	D	F	T	Q	L	D	L	E	M	S	F	V	E	V	E	D	V	L	E	L	N	E	R	L	M	A	H	V	F	R	E	A	L
Template Known Secondary structure		T	T	S	T	T							S		S										T	T		S																S	S			S											S																						T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		261	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		G	V	D	L	G	.	D	F	P	V	M	T	F	A	E	A	E	R	R	Y	G	S	D	K	P	D	L	R	N	P	M	E	L	T	D	V	A	D	L	L	K	S	V	E	F	A	V	F	A	G	P	A	N	D	P	K	G	R	V	A	A	L	R	V	P	G	G	A	S	L	T	R	K	Q	I	D	E	Y	G	N
Query Conservation							.
Alig confidence							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	E	L	P	L	P	F	P	R	L	S	Y	E	E	A	M	E	R	Y	G	S	D	K	P	D	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S														S	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	K	I	Y	G	A	K	G	L	A	Y	I	K	V	N	E	R	A	K	G	L	E	G	I	N	S	P	V	A	K	F	L	N	A	E	I	I	E	D	I	L	D	R	T	A	A	Q	D	G	D	M	I	F	F	G	A	D	N	K	K	I	V	A	D	A	M	G	A	L	R	L	K	V	G	K	D	L	G	L
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	D	E	S	K	W	A	P	L	W	V	I	D	F	P	M	F	E	D	D	G	.	E	G	G	L	T	A	M	H	H	P	F	T	S	P	K	D	M	T	A	A	E	L	K	A	A	P	E	N	A	V	A	N	A	Y	D	M	V	I	N	G	Y	E	V	G	G	G	S	V	R	I	H	N	G	D	M	Q	Q	T
Query Conservation																							.
Alig confidence		.	.																				.
Template Conservation		.	.
Template Sequence		.	.	R	E	G	F	R	F	L	W	V	V	D	F	P	L	L	E	W	D	E	E	E	E	A	W	T	Y	M	H	H	P	F	T	S	P	H	P	E	D	L	P	L	L	E	K	D	P	G	R	V	R	A	L	A	Y	D	L	V	L	N	G	V	E	V	G	G	G	S	I	R	I	H	D	P	R	L	Q	A	R
Template Known Secondary structure		.	.			S										B	S	B				T	T	T	S				B	S	S		T	T	B		B		S	T	T	T	T						G	G	G		B	B	S							T	T									B
Template Predicted Secondary structure		.	.
Template SS confidence
				415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	G	I	L	G	I	N	E	E	E	Q	R	E	K	F	G	F	L	L	D	A	L	K	Y	G	T	P	P	H	A	G	L	A	F	G	L	D	R	L	T	M	L	L	T	G	T	D	N	I	R	D	V	I	A	F	P	K	T	T	A	A	A	C	L	M	T	E	A	P	S	F	A	N	P	T	A	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	R	L	L	G	I	G	E	E	E	Q	R	E	K	F	G	F	F	L	E	A	L	E	Y	G	A	P	P	H	G	G	I	A	W	G	L	D	R	L	L	A	L	M	T	G	S	P	S	I	R	E	V	I	A	F	P	K	N	K	E	G	K	D	P	L	T	G	A	P	S	P	V	P	E	E	Q	L	R	E
Template Known Secondary structure							T			T	T	T					T							G	G	G	T																				T		S	S	G	G	G	G	S	S	S				T	T	S		B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		579	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	Q	V	V	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	M	V	V	R	P
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		573	.	.	.	.	.	.	580