Return to main results Retrieve Phyre Job Id

Job DescriptionP21889
Confidence99.97%DateThu Jan 5 11:38:40 GMT 2012
Rank27Aligned Residues102
% Identity50%Templated1l0wa1
SCOP infoOB-fold Nucleic acid-binding proteins Anticodon-binding domain
Resolution2.01

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDE
Query Conservation   


    
     
  
 
 
 
   
  
 
 

 


  
 



              
  

 
 
 
 
     
Alig confidence 



















































.


























Template Conservation   


    
     
  
 
 


   
  
 
 

 


  
 



    .         
  

 
 
 
 
   
 
Template Sequence  RRTHYAGSLRETHVGEEVVLEGWVNRRRDLGGLIFLDLRDREGLVQLVAHPA. SPAYATAERVRPEWVVRAKGLVRLRPE
Template Known Secondary structure 

SS
GGG

GGGTT

SS
TT
TT.STTTT

TT

SS
Template Predicted Secondary structure 



















.








Template SS confidence 















































































   2.......10.........20.........30.........40.........50... ......60.........70.........80
 
   81........90.........100.....
Predicted Secondary structure 











Query SS confidence 
























Query Sequence  KNINRDMATGEIEVLASSLTIINRA
Query Conservation           
 


 
  
 

   
Alig confidence 
..





















Template Conservation   ..      
  

    
 


 
Template Sequence  P. . NPRLATGRVEVELSALEVLAEA
Template Known Secondary structure 
..
TTSTTTT

Template Predicted Secondary structure 
..








Template SS confidence 
























   81 ........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions