Job Description P21889 Confidence 95.12% Date Thu Jan 5 11:38:40 GMT 2012 Rank 108 Aligned Residues 98 % Identity 16% Template d1jmca1 SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.40

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		C	G	Q	L	R	L	S	H	V	G	Q	Q	V	T	L	C	G	W	V	N	R	R	.	.	.	.	.	.	.	.	.	R	D	L	G	S	L	I	F	I	D	M	R	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence								.	.															.	.	.	.	.	.	.	.	.																										.	.
Template Conservation								.	.																																																	.	.
Template Sequence		I	A	S	L	T	P	.	.	Y	Q	S	K	W	T	I	C	A	R	V	T	N	K	S	Q	I	R	T	W	S	N	S	R	G	E	G	K	L	F	S	L	E	L	V	D	E	S	G	E	I	R	A	T	A	F	N	E	.	.	Q	V	D	K	F	F	P	L	I	E	V	N	K	V	Y	Y	F	S	K	G	T	L
Template Known Secondary structure		G	G	G			T	.	.	T																						S	S													S	S											.	.						G	G	G			T	T
Template Predicted Secondary structure								.	.																																																	.	.
Template SS confidence
		187	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		A	R	D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I	N	R	A	.	.	.	D	V	L	P
Query Conservation																															.	.	.
Alig confidence														.	.																.	.	.
Template Conservation														.	.
Template Sequence		K	I	A	N	K	Q	F	T	A	V	K	N	.	.	D	Y	E	M	T	F	N	N	E	T	S	V	M	P	C	E	D	D	H	H	L	P
Template Known Secondary structure						G	G	G						.	.	S							T	T								S		S
Template Predicted Secondary structure														.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions