Return to main results Retrieve Phyre Job Id

Job DescriptionP21889
Confidence99.91%DateThu Jan 5 11:38:40 GMT 2012
Rank40Aligned Residues104
% Identity19%Templated1eova1
SCOP infoOB-fold Nucleic acid-binding proteins Anticodon-binding domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.. .......40.........50..... ....60.........70.....
Predicted Secondary structure 













.








.....





Query SS confidence 






























.






















. . . . .



















Query Sequence  RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGS. LIFIDMRDREGIVQVFFDPDRAD. . . . . ALKLASELRNEFCIQVTGTV
Query Conservation 


    
     
  
 
 
 
   
  
 .
 

 


  
 



       .....       
  

 
 
 
 
Alig confidence 






























.






















.....



















Template Conservation     
 

      
  
 
 
 
   
  

 
 
  


    

 
                   
  

 
 
 
 
Template Sequence  RVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIV
Template Known Secondary structure 


GGG

TTTTTT

SSSTT

SSSSS
TT

TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   76...80.........90.........100.......
Predicted Secondary structure 
















Query SS confidence 































Query Sequence  RARDEKNINRDMATGEIEVLASSLTIINRADV
Query Conservation                
 


 
  
 

     
Alig confidence 





..























Template Conservation        ..        


 
  
 


 
  
Template Sequence  KKVDEP. . IKSATVQNLEIHITKIYTISETPE
Template Known Secondary structure 
SS
..
TTSS


S
Template Predicted Secondary structure 



..












Template SS confidence 































   173..... .180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions