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Job DescriptionP21889
Confidence99.03%DateThu Jan 5 11:38:40 GMT 2012
Rank60Aligned Residues276
% Identity21%Templated12asa_
SCOP infoClass II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150..... ....160.........170... ......180.........190.........200...
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Query Sequence  LKTRAKITSLVRRFMDDH. . . . . GFLDIETPMLTKATPEGA. . . . . . . RDYLVPSRVHKGKFYALPQSPQLFKQLLMM. .
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Template Sequence  YIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGAEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQH
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STTSS
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   204.....210........ .220 .........230.........240.........250.........260.........270.........
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Query Sequence  . . SGFDRYYQIVKCFRD. ED. LRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRY
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Template Sequence  DFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKAT. . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

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   85....90.........100.........110.........120.........130.........140.......
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EAAVSEEFGLAPFLPDQIHFV
Template Known Secondary structure  ...........................................................S




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   148.150.........160........
 
   360.........370.........380.........390.........400.........410.........420.........430.. .....
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Query Sequence  GLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVID. . FPMFE
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Template Sequence  HSQELLSRYPDLDAKGRERAIAKD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGAVFLVGIGGKL. .
Template Known Secondary structure  SSSS
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   169170.........180.........190.. .......200.....
 
   438.440.........450.........460.........470. ........ 480.........490.........500..
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Query Sequence  DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVA. . . . . . . . . NAYDMVIN. . . . . . GYEVGGGSVRIHNGDMQQTVFGI
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Template Sequence  . . . . . . . . . . . . . . . . . SDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDA. DTLKHQLAL
Template Known Secondary structure  .................SSS

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   206...210.........220.........230.........240.........250........ .260.......
 
   503......510.........520.........530.........540.........550...
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Query Sequence  LGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIA
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Template Sequence  TGDEDR. . . LELEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQA
Template Known Secondary structure  T
TTG...GGSTT
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   268.270... ......280.........290.........300.........310.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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