Job Description P21889 Confidence 98.47% Date Thu Jan 5 11:38:40 GMT 2012 Rank 78 Aligned Residues 120 % Identity 15% Template c3qo8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from candida albicans Resolution 2.00 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	E	G	A	.	.	.	.	.	.	.	.	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																.
Template Conservation																																																															.
Template Sequence		Y	G	V	F	L	N	Q	A	L	I	N	Y	G	L	S	F	L	S	S	K	G	Y	V	P	L	Q	A	P	V	M	M	N	K	E	V	M	A	K	T	A	Q	L	S	Q	F	D	E	E	L	Y	K	V	I	D	G	E	D	E	K	Y	L	.	I	A	T	S	E	Q	P	I	S	A	Y	H	A	G	E	W	F	E
Template Known Secondary structure																				T	T	T								S								T	T	T	S								T							T	T						.		S	S	T						T	T	T	T	T				S
Template Predicted Secondary structure																																																															.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
										208	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	.	.	.	.	.	.	.	A	D	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L
Query Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.														.
Template Conservation																																													.
Template Sequence		S	P	A	E	Q	L	P	V	R	Y	A	G	Y	S	S	C	F	R	R	E	A	G	S	H	G	K	D	A	W	G	I	F	R	V	H	A	F	E	K	I	E	Q	F	.	V	L	T	E	P	E	K	S	W	E	E	F	D	R	M	I	G	C	S	E	E
Template Known Secondary structure		S																				T	T			S	T	T		S	S	S	S	S		S									.					G	G	G
Template Predicted Secondary structure																																													.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions