Job Description P21889 Confidence 98.91% Date Thu Jan 5 11:38:40 GMT 2012 Rank 66 Aligned Residues 119 % Identity 15% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.
Query Sequence		Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	.	.	.	.	.	.	.	.	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D
Query Conservation																																				.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.																				.
Template Conservation																																																															.
Template Sequence		G	L	V	Q	L	Q	V	A	L	V	S	Y	S	L	D	F	L	V	K	R	G	Y	T	P	F	Y	P	P	F	F	L	N	R	D	V	M	G	E	V	A	Q	L	S	Q	F	D	E	E	L	Y	Q	V	S	G	D	G	D	K	K	Y	L	.	I	A	T	S	E	M	P	I	A	A	Y	H	R	G	R	W	F	T
Template Known Secondary structure																				T	T	T								S											S								T						S	S	S	S					.		S	S	T								T	T	T				S
Template Predicted Secondary structure																																																															.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
								208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	.	.	.	.	.	.	.	R	Q	P	E	F	T	Q	I	D	V	E	T	.	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L
Query Conservation		.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		E	L	K	E	P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	H	L	E	D	M	I	T	T	S
Template Known Secondary structure				S	S															T	T		S	S	S			S	T	T	S	S		S													S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions