Job Description P21889 Confidence 41.87% Date Thu Jan 5 11:38:40 GMT 2012 Rank 147 Aligned Residues 73 % Identity 19% Template c3kojA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ycf41; PDBTitle: crystal structure of the ssb domain of q5n255_synp6 protein2 from synechococcus sp. northeast structural genomics3 consortium target snr59a. Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.				.	.			.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.			.	.						.	.	.	.
Query SS confidence												.	.	.			.	.						.	.	.	.
Query Sequence		Q	V	T	L	C	G	W	V	N	R	.	.	.	R	R	.	.	D	L	G	S	L	.	.	.	.	I	F	I	D	M	R	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R	A	R	D	E	K	N	I	N	R	D	M
Query Conservation												.	.	.			.	.						.	.	.	.
Alig confidence												.	.	.			.	.						.	.	.	.																				.	.																														.	.	.	.
Template Conservation																																															.	.																														.	.	.	.
Template Sequence		S	C	I	L	Q	A	T	V	V	E	A	P	Q	L	R	Y	A	Q	D	N	Q	T	P	V	A	E	X	V	V	Q	F	P	G	A	P	A	R	L	K	V	V	G	W	G	A	.	.	V	A	Q	E	L	Q	D	R	C	R	L	N	D	E	V	V	L	E	G	R	L	R	I	N	S	E	K	Q	T	.	.	.	.
Template Known Secondary structure																			T	T	S	S	S																						T		.	.											T	T																		.	.	.	.
Template Predicted Secondary structure																																															.	.																														.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	E	I	E	V	L	A	S	S	L	T
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	E	L	T	V	T	R	V	H
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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