 |
Job Description | P21889 | Confidence | 97.98% | Date | Thu Jan 5 11:38:40 GMT 2012 |
Rank | 87 | Aligned Residues | 77 |
% Identity | 21% | Template | c3kf6A_ |
PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:protein stn1; |
PDBTitle: crystal structure of s. pombe stn1-ten1 complex
|
Resolution | 1.65 Å |
|
 |
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | V | T | L | C | G | W | V | N | R | R | R | D | L | G | S | L | I | F | I | D | M | R | D | R | E | G | . |
I | V | Q | V | F | F | D | P | D | . |
R | A | D | A | L | K | L | A | S | E | L | R | N | E | F | C | I | Q | V | T | G | T | V | R | A | R | D | E | K | N | I | N | R | D | M | A | T | G | E | I | E |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |
|
|
|   |   |
| . |   |
|
|
|
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |
Template Sequence |   |
R | W | I | Q | I | V | G | Y | I | A | A | I | D | I | Y | E | G | K | H | V | L | T | V | D | D | C | S | G | M | V | L | R | V | V | F | I | I | Q | D | D | F | S | M | S | K | R | A | I | S | M | S | P | G | N | V | V | C | V | F | G | K | I | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | F | R | S | E | V | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
| S | S | S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | A | S | S | L | T | I | I |
Query Conservation |   |
|   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |
|
Template Sequence |   |
L | I | A | Q | S | F | E | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|