Job Description P21889 Confidence 97.60% Date Thu Jan 5 11:38:40 GMT 2012 Rank 92 Aligned Residues 115 % Identity 12% Template c3ikmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.				.	.	210	.
Predicted Secondary structure																																																																	.	.	.								.	.	.
Query SS confidence																																																																	.	.	.								.	.	.
Query Sequence		L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	.	.	.	L	M	M	S	G	F	D	.	.	.	R	Y	Y	Q
Query Conservation																																																																	.	.	.								.	.	.
Alig confidence																																			.	.	.	.																											.	.	.								.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		V	E	L	R	K	N	L	A	A	E	W	W	T	S	V	V	V	F	R	E	Q	V	F	P	V	D	A	L	H	H	K	P	G	.	.	.	.	P	L	L	P	G	D	S	A	F	R	S	G	K	L	R	E	N	L	L	H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	K	R	L	P	Y	G	L	A	Q
Template Known Secondary structure																			S	S			B							S					.	.	.	.		S	S	S	S				S	S				S		S																G	G	G	S						B
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		I	V	K	C	F	R	D	E	D	L	R	A	D	.	.	.	.	.	.	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.												.
Template Conservation																																.
Template Sequence		I	G	V	C	F	H	P	V	F	D	T	K	Q	I	R	N	G	V	K	S	I	G	E	K	T	E	A	S	L	V	.	W	F	T	P	P	R	T	S	N	Q	W	L	D	F	W	L	R	H	R	L	Q
Template Known Secondary structure															S	S	S		S													.					T	T
Template Predicted Secondary structure																																.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions