Job Description P21889 Confidence 96.36% Date Thu Jan 5 11:38:40 GMT 2012 Rank 100 Aligned Residues 115 % Identity 14% Template c3icaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: the crystal structure of the beta subunit of a phenylalanyl-trna2 synthetase from porphyromonas gingivalis w83 Resolution 2.44 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.			.
Predicted Secondary structure																																.	.	.	.	.	.																																		.	.	.	.					.	.
Query SS confidence																																.	.	.	.	.	.																																		.	.	.	.					.	.
Query Sequence		R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	.	.	.	.	.	.	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	.	.	.	.	S	G	F	D	.	.	R
Query Conservation																																.	.	.	.	.	.																																		.	.	.	.					.	.
Alig confidence																																.	.	.	.	.	.																																		.	.	.	.					.	.
Template Conservation
Template Sequence		R	Y	K	W	Q	T	V	V	S	E	Q	L	V	G	A	G	F	N	E	I	L	N	N	S	L	T	A	G	S	Y	Y	E	G	L	K	S	H	P	R	E	X	A	V	E	L	X	N	P	L	S	Q	E	L	N	C	X	R	Q	T	L	L	F	G	G	L	E	T	L	S	H	N	L	R	R	K	H	L	S	L	Y
Template Known Secondary structure																T	T								S				G	G	G	G	T	T		S	S	S		G	G	G			B		S	S		S		S	S	S					S		S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	R	Q	P	.	.	.	.	.	.	E	F	T	Q	I	D	V	E	T	S	.	.	.	.	.	.	.	.	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L
Query Conservation																					.	.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	E	W	G	K	C	Y	R	F	H	A	A	K	R	T	D	E	T	P	L	A	A	Y	A	E	D	D	R	L	G	I	W	I	C	G	Q	R	V	H	P	E	E	P	T	S	V	F	E	L	K	A	V	V	E	Q	V	L	C	R	V
Template Known Secondary structure															S	S	S	S	S		S																	B							B																	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions