Job Description P21889 Confidence 62.74% Date Thu Jan 5 11:38:40 GMT 2012 Rank 139 Aligned Residues 76 % Identity 18% Template c3fhwB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:primosomal replication protein n; PDBTitle: crystal structure of the protein prib from bordetella parapertussis.2 northeast structural genomics consortium target bpr162. Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.				.	.		.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure												.	.	.			.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.			.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	T	L	C	G	W	V	N	R	.	.	.	R	R	.	D	L	G	S	L	I	F	I	D	M	R	D	R	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R	A	R	D	E
Query Conservation												.	.	.			.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.			.														.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																							.	.	.
Template Conservation																																																						.	.	.																							.	.	.
Template Sequence		T	L	E	L	S	A	R	V	L	E	C	G	A	X	R	H	T	P	A	G	L	P	A	L	E	L	L	L	V	H	E	S	E	V	V	E	A	G	R	R	V	E	L	T	I	S	A	V	A	L	G	D	.	.	.	L	A	L	L	L	A	D	T	P	L	G	T	E	X	Q	V	Q	G	F	L	A	P	.	.	.
Template Known Secondary structure																			T	T	S																															T		.	.	.						T	T			T	T												.	.	.
Template Predicted Secondary structure																																																						.	.	.																							.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	R	K	D	S	V	K	V	K	L	H	L	Q	Q	A	R	R	I
Template Known Secondary structure		.	.	.	.	S	S	T	T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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