Job Description P21889 Confidence 98.30% Date Thu Jan 5 11:38:40 GMT 2012 Rank 83 Aligned Residues 121 % Identity 15% Template c3errB_ PDB info PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase Resolution 2.27 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																																							.	.	.	.
Query SS confidence																																				.	.	.	.																																							.	.	.	.
Query Sequence		A	Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	.	.	.	.	T	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	.	.	.	.
Query Conservation																																				.	.	.	.																																							.	.	.	.
Alig confidence																																				.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		G	D	L	A	L	Y	E	L	A	L	L	R	F	A	M	D	F	M	A	R	R	G	F	L	P	M	T	L	P	S	Y	A	R	E	K	A	F	L	G	T	G	H	F	P	A	Y	R	D	Q	V	W	A	I	A	E	T	D	L	Y	L	T	G	T	A	E	V	V	L	N	A	L	H	S	G	E	I	L	P	Y	E
Template Known Secondary structure																						T	T								S											T		T	T	T	T	G	G	G					T	T	S	S					S	S	T								T	T	T					G	G
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
					207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.				.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.	.	.	.			.	.	.														.
Query SS confidence		.	.	.																	.	.	.	.			.	.	.														.
Query Sequence		.	.	.	D	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	.	.	.	.	A	D	.	.	.	R	Q	P	E	F	T	Q	I	D	V	E	T	S	.	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L
Query Conservation		.	.	.																	.	.	.	.			.	.	.														.
Alig confidence		.	.	.																	.	.	.	.			.	.	.														.
Template Conservation
Template Sequence		A	L	P	L	R	Y	A	G	Y	A	P	A	F	R	S	E	A	G	S	F	G	K	D	V	R	G	L	M	R	V	H	Q	F	H	K	V	E	Q	Y	V	L	T	E	A	S	L	E	A	S	D	R	A	F	Q	E	L	L	E	N	A
Template Known Secondary structure		G		S															S			S	S	S		S	S	S	S	S		S													S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions