Job Description P21889 Confidence 97.34% Date Thu Jan 5 11:38:40 GMT 2012 Rank 93 Aligned Residues 84 % Identity 25% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.										.	.	.
Query SS confidence																					.	.	.	.	.	.	.										.	.	.
Query Sequence		L	R	L	S	H	V	G	Q	Q	V	T	L	C	G	W	V	N	R	R	.	.	.	.	.	.	.	R	D	L	G	S	L	I	F	I	.	.	.	D	M	R	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R	A	R
Query Conservation																					.	.	.	.	.	.	.										.	.	.
Alig confidence																					.	.	.	.	.	.	.										.	.	.																				.	.	.	.	.																	.	.
Template Conservation																																																											.	.	.	.	.																	.	.
Template Sequence		I	G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	D	.	.	.	.	.	I	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	.	.
Template Known Secondary structure		G	G	G			S	S																					T	T	S													T	T									G	G	G	G	G	.	.	.	.	.	S				T	T											.	.
Template Predicted Secondary structure																																																											.	.	.	.	.																	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I	N	R	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	G	Y	Y	G	G	L	E	C	T	A	N	Y	V	E	I	L	K	K	G	E
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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